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​​10 Best Time Clocking and Employee Payroll System (2022)



Best Time Clocking and Employee Payroll System

Whether you’re a small business or a large corporation, time tracking and payroll systems are the backbones of your business.

They help you keep track of your employees’ hours and ensure they’re paid accordingly.

The best time clock and employee payroll system will help streamline this process so you can focus on other aspects of your business.

What is a Time Clocking System?

A time clock system is software that tracks the time worked by employees. The system can calculate the hours worked by employees and the wages due.

It can also be used to track vacation time, sick days, and overtime.

What is an Employee Payroll System?

An employee payroll system is a software solution to manage employee time and attendance, paychecks and payroll taxes, benefits, promotions, and more. Employee payroll systems can be manual or automated.

Cloud-Based vs. On-Premise Solutions: If you want to use the cloud for your business’s technology needs, cloud-based solutions are ideal because they offer an easy way for employees to access all the information about their work schedules on their devices.

While there are many benefits of using cloud software (like the ease of use), some downsides may make it more difficult for some businesses to implement. 

The Best Time Clocking and Employee Payroll System

Here are some of the best time clocking and employee payroll systems:

  • Time Doctor
  • BambooHR
  • TimeClock Plus
  • Clockify
  • Quickbooks Time
  • OnTheClock
  • TimeClick
  • Rippling
  • Paychex Flex
  • PurelyHR

1. Time Doctor

​​10 Best Time Clocking and Employee Payroll System

Time Doctor is a cloud-based time tracking software that helps you track your time, manage projects, and get paid on time.

Time Doctor is easy to use and integrates with other popular applications.

You can install it in minutes, start tracking your work hours immediately, and get paid by clients or employers as soon as they pay their invoices through the Time Doctor platform.

Time Doctor is an excellent choice for businesses that need to track hours in real-time. You can use it to manage your employees, payroll, and more; it is one of the best time clocking and employee payroll systems.

2. BambooHR

​​10 Best Time Clocking and Employee Payroll System

BambooHR is one of the most popular time-tracking software systems today.

It comes with everything you’ll need to stay compliant with labor laws while also improving your employees’ productivity and efficiency at work and for you as an employer.

BambooHR is a cloud-based time and attendance system that allows you to clock in and out, track attendance and leave, and manage payroll.

It’s easy to use, with no installation required and is one of the best time clocking and employee payroll systems.

BambooHR offers several features, including a free trial, Web-based time tracking, Real-time data updates (no more manual adjustments), and many more. 

3. TimeClock Plus

TimeClock Plus

TimeClock Plus is a time clock app that allows you to track employee attendance, schedule employees, and track how long your employees are working.

It’s a cloud-based time clock system for Mac, Microsoft Windows, and Linux. You can use it for small businesses with just one location or multiple locations worldwide. TimeClock is one of the best time clocking and employee payroll systems. 

TimeClock Plus provides you with a fully integrated solution for managing your employees’ time cards, scheduling shifts, recording attendance data, calculating wages and bonuses based on policies set by management as well as automating tax forms such as W2s (including 1099s), I9s/E-Verify documents or tax withholding information return forms 941/943/1042S using an easy drag-and-drop interface builder toolkit which makes it easy for anyone inexperienced in IT programming knowledge levels. 

4. Clockify


Clockify is a time tracking software that allows you to track employee time accurately. This type of program is often called a “time clock” or “employee time clock.”

Clockify can be installed on your computer or device and connect with our cloud-based system for backup.

It will also keep track of employee timesheets, which are helpful for payroll purposes. The benefits of using Clockify include Accurate record keeping, Cost savings from centralized payroll processing, improved productivity, etc.

5. Quickbooks Time

Quickbooks Time

Quickbooks Time is a time clock system that integrates with Quickbook. You can use it to track your employees’ hours and then export that data into Quickbooks.

It’s a bit more expensive than most other solutions, but it’s also one of the best options out there in terms of features and ease of use.

The most significant benefit of this product is probably its interface, which is incredibly easy to use if you’re already familiar with Quickbooks.

It has a small footprint, so it doesn’t take up too much space on your computer or laptop, but it also offers plenty of features for businesses looking for something more advanced than just clocking in/out times for employees.

6. OnTheClock


OnTheClock is a cloud-based time and attendance solution that works with any mobile device.

The OnTheClock mobile app for iOS, Android, and Windows allows employees to clock in/out from their phone or tablet, providing accurate, real-time data to your payroll system.

OnTheClock offers a full suite of features, including Employee management, Reporting tools, Customizable shifts, and many more. Ontheclock is one of the best time clocking and employee payroll systems.

7. TimeClick

TimeClick is a web-based time tracking software that tracks employee time and attendance, payroll, and timesheets.

Use TimeClick to track your employee’s daily working hours and monitor their productivity so you can focus on what matters most to their work.

The app offers a free 30 days trial period for our users so they can experience how easy it is to use TimeClick. TimeClick is one of the best time clocking and employee payroll systems. 

8. Rippling

Rippling is a cloud-based time and attendance software solution that offers many features.

Rippling is designed to make it easy for employees to clock in and out while tracking their hours worked and giving managers the information they need to run payroll.

The software provides real-time reporting and analytics to stay on top of your company’s productivity and integrate with other systems like HRIS or payroll services.

9. Paychex Flex

Paychex Flex is a time and attendance system that allows employees to clock in and out of work.

This cloud-based system can be accessed anywhere, which makes it ideal for remote workers.

The app also has automated pay stub generation, payroll tax, and leave management.

Paychex Flex provides the tools you need to create employee schedules and track hours worked by your team members.

You can set up different pay cycles for each employee depending on their role in the company or industry.

10. PurelyHR

PurelyHR is a cloud-based time clock software that lets you track time, manage payroll, and pay employees.

The free version is limited to 5 employees but includes the most essential features for small businesses like employee scheduling and leave management.

PurelyHR offers a 14-day free trial with full functionality of their system so you can see if this is the right solution for your business before committing any money.

PurelyHR is one of the best time clocking and employee payroll systems. 

Bottom Line

There are many time clocks and employee pay systems, but we have only listed some of the best.

These might be right up your alley if you’re looking for an easy-to-use solution to help manage your timekeeping and payroll process.

Kevin Afoma Onwuagbanusi is a freelance writer and a graduate of Mechanical Engineering (BEng.) and Masters in Accounting (MSc) with 8+ years of experience writing across several niches, with a remarkable likeness to crypto, and personal finances, automotive, games, and technology.